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<article article-type="review-article" dtd-version="1.0" specific-use="sps-1.8" xml:lang="en" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">
	<front>
		<journal-meta>
			<journal-id journal-id-type="publisher-id">rica</journal-id>
			<journal-title-group>
				<journal-title>Revista internacional de contaminación ambiental</journal-title>
				<abbrev-journal-title abbrev-type="publisher">Rev. Int. Contam.
					Ambient</abbrev-journal-title>
			</journal-title-group>
			<issn pub-type="ppub">0188-4999</issn>
			<publisher>
				<publisher-name>Universidad Nacional Autónoma de México, Centro de Ciencias de la Atmósfera</publisher-name>
			</publisher>
		</journal-meta>
		<article-meta>
			<article-id pub-id-type="doi">10.20937/RICA.53357</article-id>
			<article-id pub-id-type="publisher-id">00021</article-id>
			<article-categories>
				<subj-group subj-group-type="heading">
					<subject>Artículos de revisión</subject>
				</subj-group>
			</article-categories>
			<title-group>
				<article-title>MINING APPLICATIONS OF IMMOBILIZED MICROBIAL CELLS IN AN ALGINATE
					MATRIX: AN OVERVIEW</article-title>
				<trans-title-group xml:lang="es">
					<trans-title>APLICACIONES MINERAS DE CÉLULAS MICROBIANAS INMOVILIZADAS EN MATRIZ
						DE ALGINATO: UNA VISIÓN GENERAL</trans-title>
				</trans-title-group>
			</title-group>
			<contrib-group>
				<contrib contrib-type="author">
					<name>
						<surname>Giese</surname>
						<given-names>Ellen C.</given-names>
					</name>
					<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
					<xref ref-type="corresp" rid="c1">*</xref>
				</contrib>
				</contrib-group>
				<aff id="aff1">
					<label>1</label>
					<institution content-type="original">Centro de Teconologia Mineral - CETEM,
						Avenida Pedro Calmon 900, CEP 21941-908, Rio de Janeiro-RJ,
						Brasil</institution>
						<institution content-type="normalized">Centro de Teconologia Mineral</institution> 
					<institution content-type="orgname">Centro de Teconologia Mineral</institution>
					<addr-line>
						<named-content content-type="city">Rio de Janeiro</named-content>
					</addr-line>
					<country country="BR">Brasil</country>
					<email>egiese@cetem.gov.br</email>
				</aff>
			<author-notes>
				<corresp id="c1">
					<label>*</label>E-mail: <email>egiese@cetem.gov.br</email>
				</corresp>
			</author-notes>
			<!--<pub-date date-type="pub" publication-format="electronic">
				<day>04</day>
				<month>05</month>
				<year>2021</year>
			</pub-date>
			<pub-date date-type="collection" publication-format="electronic">-->
				<pub-date pub-type="epub-ppub">
				<month>08</month>
				<year>2020</year>
			</pub-date>
			<volume>36</volume>
			<issue>3</issue>
			<fpage>775</fpage>
			<lpage>787</lpage>
			<history>
				<date date-type="received">
					<day>01</day>
					<month>07</month>
					<year>2018</year>
				</date>
				<date date-type="accepted">
					<day>01</day>
					<month>10</month>
					<year>2019</year>
				</date>
			</history>
			<permissions>
				<license license-type="open-access"
					xlink:href="https://creativecommons.org/licenses/by-nc-nd/4.0/" xml:lang="en">
					<license-p>This is an open-access article distributed under the terms of the
						Creative Commons Attribution License</license-p>
				</license>
			</permissions>
			<abstract>
				<title>ABSTRACT</title>
				<p>Immobilized microbial cells have been used extensively in various industrial
					processes. However, immobilized cells have not been used widely for mining
					industrial applications. Cell immobilization consists of a technique by which
					microorganisms are confined through physical or chemical interactions in a
					matrix, or fixed to the surface of the immobilizing agent. In recent years,
					entrapment of cells within spheres of Ca<sup>2+</sup> alginate has become the
					most widely used technique for immobilizing living cells. This review examines
					many of the scientific and technical aspects involved in using Ca<sup>2+</sup>
					alginate immobilized microbial cells in mining activities, with a particular
					focus on the biohydrometallurgical industrial applications and processes of soil
					bioremediation in heavy metal contaminated mining areas, environmental recovery
					of atmospheric emissions containing H<sub>2</sub>S and treatment of acid mine
					drainage.</p>
			</abstract>
			<trans-abstract xml:lang="es">
				<title>RESUMEN</title>
				<p>Las células microbianas inmovilizadas se han utilizado ampliamente en diversos
					procesos industriales. Sin embargo, no se han usado de manera tan extensa en las
					aplicaciones para la industria minera. La inmovilización celular consiste en una
					técnica mediante la cual los microorganismos se confinan a través de
					interacciones físicas o químicas en una matriz, o se fijan a la superficie del
					agente inmovilizador. En los últimos años, el atrapamiento de las células dentro
					de esferas de alginato de Ca<sup>2+</sup> se ha convertido en la técnica más
					utilizada para inmovilizar las células vivas. Esta revisión examina muchos de
					los aspectos científicos y técnicos que abarca el uso de células microbianas
					inmovilizadas con alginato de Ca<sup>2+</sup> en aplicaciones en las actividades
					mineras, con un enfoque particular en las industriales biohidrometalúrgicas y en
					los procesos de biorremediación de suelos en áreas mineras contaminadas con
					metales pesados, recuperación ambiental de emisiones atmosféricas que contienen
						H<sub>2</sub>S y tratamiento del drenaje ácido de minas.</p>
			</trans-abstract>
			<kwd-group xml:lang="en">
				<title>Key words:</title>
				<kwd>Ca<sup>2+</sup> alginate</kwd>
				<kwd>cell immobilization</kwd>
				<kwd>environmental recovery</kwd>
				<kwd>mining industry</kwd>
			</kwd-group>
			<kwd-group xml:lang="es">
				<title>Palabras clave:</title>
				<kwd>alginato de Ca<sup>2+</sup></kwd>
				<kwd>industria minera</kwd>
				<kwd>inmovilización celular</kwd>
				<kwd>recuperación ambiental</kwd>
			</kwd-group>
			<counts>
				<fig-count count="2"/>
				<table-count count="0"/>
				<equation-count count="9"/>
				<ref-count count="99"/>
				<page-count count="13"/>
			</counts>
		</article-meta>
	</front>
	<body>
		<sec sec-type="intro">
			<title>INTRODUCTION</title>
			<p>Immobilization techniques have been used in a variety of scientific and industrial
				applications. This technology is a general term to describe many different forms of
				microbial cell attachment or entrapment, presenting advantages over processes using
				free cells mainly in bioprocesses operated in bioreactors (<xref ref-type="bibr"
					rid="B9">Bergmaier et al. 2005</xref>).</p>
			<p>Besides the advantages that the use of immobilized microbial cells confers to the
				fermentative processes, e.g., use of a flow system with multiple circulation of the
				substrate; removal of reaction products; biomass separation in upstream processess
					(<xref ref-type="bibr" rid="B18">Covizzi et al. 2007</xref>); immobilized cells
				can be also used as catalysts in situ, e.g., for biodegradation of xenobiotic
				compounds in soils (<xref ref-type="bibr" rid="B87">Usha et al. 2010</xref>) or for
				the treatment of textile effluents under dye biosorption reactions (<xref
					ref-type="bibr" rid="B66">Mitter and Corso 2013</xref>). Immobilization of
				microbial cells on a suitable support can simplify the wastewater treatment as the
				entrapment of living cells increases the retention time of cells on contaminated
				water (<xref ref-type="bibr" rid="B49">Kumar and Raju 2008</xref>).</p>
			<p>These characteristics are very promising for the development of new technologies in
				industrial areas that depend on large-scale processes with greater demands than the
				fermentative processes, as the case of the mining industry. There is growing
				awareness of the geochemical significance of microbes among researchers in geology,
				mineralogy and geochemistry, which has been causing the microorganisms to be
				exploited for the development of new technologies in these areas of interest (<xref
					ref-type="bibr" rid="B24">Gaad 2010</xref>).</p>
			<p>The wastes generated by the mining industry contain high concentrations of highly
				toxic and non biodegradable metals and metalloids which can be mobilized, resulting
				in leaching into groundwater and surface water. Sustainable mining wastewater
				treatment technologies have been emerged and the technical applicability,
				cost-effectiveness and plant simplicity from biosorption process are the key factors
				that have been discussed (Pinto et al. 2011, Agbesi et al. 2017). These metals must
				be removed from the polluted streams in order to meet increasingly stringent
				environmental quality standards as also as a way of reusing them within the new
				concepts of circular economy.</p>
			<p>Cell immobilization using an alginate matrix is very versatile and presents different
				applications, allowing the use of live or inactivated cells in bioreactors (<xref
					ref-type="bibr" rid="B51">Kureel et al. 2017</xref>), enabling innovative
				applications in different areas. Bioreactors operated using microbial cells
				immobilized on Ca<sup>2+</sup> alginate beads has been extensively described in the
				literature in fermentation processes, e.g., for production of acids (<xref
					ref-type="bibr" rid="B92">Yoo et al. 1996</xref>), carotenoids (<xref
					ref-type="bibr" rid="B25">Garbayo et al. 2003</xref>), sweeteners (<xref
					ref-type="bibr" rid="B45">Kawaguti and Sato 2011</xref>), fermented beverages
					(<xref ref-type="bibr" rid="B27">García-Martínez et al. 2015</xref>) and ethanol
					(<xref ref-type="bibr" rid="B6">Bangrak et al. 2011</xref>).</p>
			<p>Encapsulation of microbial cells in a gel-matrix has been emerged as a successful and
				useful method for commercial aplications. The alginate matrix has unique properties
				that make it a product of great commercial importance for its ability to gel and
				thicken solutions, as well as its biotechnological potential as a support for the
				immobilization of enzymes and cells (<xref ref-type="bibr" rid="B83">Smidsrød and
					Skjåk-Braek 1990</xref>, <xref ref-type="bibr" rid="B29">Giese 2015</xref>). </p>
			<p>Ca<sup>2+</sup> alginate immobilized biocatalysts have been outstanding for
				presenting applications in other areas with emerging potential. The use of
				immobilized cells has been investigated as an alternate technology for some
				processes that involve the mining industries (<xref ref-type="bibr" rid="B61"
					>Martínez and Parada 2013</xref>) as well as related processes for the recovery
				of degraded mining areas (<xref ref-type="bibr" rid="B80">Sinha and Khare
					2012</xref>, <xref ref-type="bibr" rid="B7">Bayat et al. 2015</xref>). </p>
			<p>For example, the use of immobilized cells in bioleaching (<xref ref-type="bibr"
					rid="B61">Martínez and Parada 2013</xref>), heavy metals (<xref ref-type="bibr"
					rid="B80">Sinha and Khare 2012</xref>, <xref ref-type="bibr" rid="B65">Mishra
					2013</xref>), mercury (<xref ref-type="bibr" rid="B81">Sinha and Khare
					2012</xref>) and rare-earth elements biosorption (<xref ref-type="bibr"
					rid="B15">Coimbra et al. 2017</xref>, <xref ref-type="bibr" rid="B17">Corrêa et
					al. 2017</xref>, <xref ref-type="bibr" rid="B16">Coimbra et al. 2019</xref>),
				acid mine drainage (<xref ref-type="bibr" rid="B57">Long et al. 2004</xref>),
				bioremediation (<xref ref-type="bibr" rid="B98">Zommere and Nikolajeva 2017</xref>),
				and H<sub>2</sub>S removal (Chung et al. 2010) have all been examined. However, most
				of these investigations were perfomed at laboratorial level, and applications of
				immobilized cells in mining activities in the open environment and industrial scale
				have yet to be realized.</p>
			<p>This paper consists in an overview about immobilization of microbial cells in
					Ca<sup>2+</sup> an alginate matrix for applications in the mining industry, with
				emphasis on applying this technology for heap bioleaching proccesses and for in situ
				recovery of environments contaminated by mining activities.</p>
			<sec>
				<title>Ca<sup>2+</sup> alginate matrix</title>
				<p>Alginate is a linear polysaccharide composed of units of mannuronic acid bound by
					glycosidic bonds of β-D-(1→4) type, and also, by units of guluronic acid, linked
					by α-D-(1→4) bonds. These polysaccharides were first isolated from brown algae
					belonging to the genera <italic>Laminaria</italic> and
						<italic>Macrocystis</italic>, and are also produced by bacteria of the
					genera <italic>Pseudomonas</italic> and <italic>Azotobacter</italic>, being that
					the proportion of β-D-mannurate and α-D-guluronate units depends on the alginate
					origin (<xref ref-type="bibr" rid="B36">Guo et al. 2006</xref>). </p>
				<p>The proportion between these monosaccharides is important to the mechanical
					properties of the alginate gel spheres. The degree of polymerization of alginate
					chains also exerts a determinant influence on their ability to form gel, which
					depends on the presence of divalent ions such as Ca<sup>2+</sup> or
						Mg<sup>2+</sup> and residues of D-guluronic acid (<xref ref-type="bibr"
						rid="B55">Lee and Mooney 2012</xref>).</p>
				<p>Alginate particles can be obtained by different methods, including emulsification
					and, especially, the drip technique of sodium alginate solutions containing
					microbial cells in calcium chloride solution (CaCl<sub>2</sub>). In the latter
					case, the high concentration of the polymer matrix favors the formation of
					compact beads with uniform surfaces, which have high mechanical resistance and
					stability both during the fermentation process and during the storage time
						(<xref ref-type="bibr" rid="B90">Vos et al. 2009</xref>). </p>
				<p>Ca<sup>2+</sup> alginate beads formation occurs through a reaction called ionic
					gelling (<xref ref-type="bibr" rid="B82">Skjåk-Bræk et al. 1989</xref>). To do
					so, a suspension of microbial cells in Na<sup>+</sup> alginate solution is
					dripped in an ionic solution of suitable concentration, usually CaCl<sub>2</sub>
					to form the gel of different porosity according to the pre-optimized conditions
						(<xref ref-type="bibr" rid="B11">Blandino et al. 1999</xref>, <xref
						ref-type="bibr" rid="B18">Covizzi et al. 2007</xref>), as illustrated in
						<xref ref-type="fig" rid="f1">figure 1</xref>.</p>
				<p>
					<fig id="f1">
						<label>Fig 1</label>
						<caption>
							<title>Schematic illustration for the preparation of Ca<sup>2+</sup>
								alginate beads containing immobilized cells. In detail, the
									Na<sup>+</sup> monovalent ion substitution by Ca<sup>2+</sup>
								divalent ion in alginate-matrix.</title>
						</caption>
						<graphic xlink:href="0188-4999-rica-36-03-775-gf1.png"/>
					</fig>
				</p>
				<p>Binding Ca<sup>2+</sup> ions to guluronate residues results in the formation of
					consistent and insoluble alginate gel beads with controllable swelling
					properties, low toxicity, size and defined pore distribution. Physical-chemical
					characteristics of immobilized biocatalysts will depend on the flow velocity,
					density of the polymer solution and concentration of ionic solution in which the
					gel will be formed (<xref ref-type="bibr" rid="B99">Wang et al. 2005</xref>). </p>
				<p>Gelling properties of alginate come from linkages between divalent cations and
					guluronate residues, which favor the formation of a thermostable gel. The degree
					of substitution of Ca<sup>2+</sup> ions depends on the contact time between the
					spheres formed and the ionic solution, as well as the acidity of this solution.
					For example, the substitution is maximal at pH close to neutrality at the
					contact time of 1 hour in the presence of Ca<sup>2+</sup> ions (<xref
						ref-type="bibr" rid="B23">Fundueanu et al. 1999</xref>).</p>
				<p>Alginate-based products are popular in many industries, including food production
					and in pharmaceutical and biomedical applications (Yeung and Kennedy 2019).
						Ca<sup>2+</sup> alginate beads have been used successfully in fermentative
					processes in the food industry, e.g., as a carrier for enzymes for winemaking
						(<xref ref-type="bibr" rid="B62">Martín et al. 2019</xref>) and as adsorbent
					of contaminants in juice fruits (<xref ref-type="bibr" rid="B21">Farbo et al.
						2016</xref>). This gelly matrix have been also employed in wastewater
					treatment processes (<xref ref-type="bibr" rid="B48">Kube et al.
					2019</xref>).</p>
				<p>Immobilized microorganisms in Ca<sup>2+</sup> alginate beads have been
					extensively used in food processes (Souza et al. 2009), bioetanol production
					(Santos et al. 2018) and bioremediation (<xref ref-type="bibr" rid="B46">Khalid
						et al. 2018</xref>). The use of biocatalysts in mining activities has been
					little described in the literature and deserves attention due to the minimized
					costs and lower environmental impact.</p>
			</sec>
		</sec>
		<sec>
			<title>BIOLEACHING PROCESSES</title>
			<p>Bioleaching is a hydrometallurgical process of mineral sulfides dissolution by the
				action of a group of microorganisms capable of producing oxidizing agents (Schippers
				2007, <xref ref-type="bibr" rid="B67">Musa et al. 2015</xref>, <xref ref-type="bibr"
					rid="B31">Giese 2017</xref>). In recent years, bioleaching techniques were
				applied successfully and commercially for extracting copper and gold from various
				samples, such as sludge (Pathak et al. 2009), flyashes (Park and Liang 2019),
				sediments (<xref ref-type="bibr" rid="B28">Gentina and Acevedo 2016</xref>), soils
					(<xref ref-type="bibr" rid="B1">Abdullah et al. 2017</xref>), batteries (<xref
					ref-type="bibr" rid="B5">Bahaloo-Horeh et al. 2016</xref>), etc.</p>
			<p>Different hydrometallurgicall technologies have been used to the extraction of
				valuable metals, however, recovery of minerals containing sulfide, are based on the
				activities of chemolithotrophic bacteria and fungi, as they convert insoluble metal
				sulfides residues into soluble metal sulfates (Okoh et al. 2018). The gram-negative
				bacterium <italic>Acidithiobacillus ferrooxidans</italic> was the first microbial
				species to be used in the bioleaching processes of copper mineral sulfides, and is
				currently used in the solubilization of different metals. This bacteria is
				acidophilic, aerobic, mesophilic, autotrophic and chemotrophic, being able to obtain
				energy from the oxidation of Fe<sup>2+</sup> ions to Fe<sup>3+</sup> as well as
				reduced sulfur compounds (<xref ref-type="bibr" rid="B76">Schippers 2004</xref>). </p>
			<p>Microorganisms are able to mobilize metals through the formation of organic and
				inorganic acids, excretion of complexing agents and, more common, through oxidation
				and reduction reactions (<xref ref-type="bibr" rid="B64">Mishra et al. 2005</xref>).
				In general, bioleaching reactions occurs in two different ways, as described below
					(<xref ref-type="bibr" rid="B41">Jafari et al. 2018</xref>, <xref
					ref-type="bibr" rid="B32">Giese 2019</xref>):</p>
			<p>a) thiosulfate mechanism (FeS<sub>2</sub>, MoS<sub>2</sub>, and WS<sub>2</sub>),
				where Fe<sup>3+</sup> ions oxides metal sulfides generating thiosulfate as
				intermediary and main end-product:</p>
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							<mml:mrow>
								<mml:mi mathvariant="normal">F</mml:mi>
								<mml:mi mathvariant="normal">e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>3</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mn>5</mml:mn>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mi mathvariant="normal">O</mml:mi>
						<mml:mo>→</mml:mo>
						<mml:mn>2</mml:mn>
						<mml:mi mathvariant="normal">S</mml:mi>
						<mml:msubsup>
							<mml:mrow>
								<mml:mi mathvariant="normal">O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>4</mml:mn>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>-</mml:mo>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msubsup>
						<mml:mo>+</mml:mo>
						<mml:mn>8</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">F</mml:mi>
								<mml:mi mathvariant="normal">e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mn>10</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
					</mml:math>
					<label>(2)</label>
				</disp-formula>
			</p>
			<p>b) polysulfide mechanism (ZnS, CuFeS<sub>2</sub>, and PbS), where metal
				solubilization results from a combined attack by Fe<sup>3+</sup> ions and protons,
				and the elemental sulfur (S<sub>0</sub>) is the main intermediate:</p>
			<p>
				<disp-formula id="e3">
					<mml:math id="m3" display="block">
						<mml:mi mathvariant="normal">M</mml:mi>
						<mml:mi mathvariant="normal">S</mml:mi>
						<mml:mo>+</mml:mo>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">F</mml:mi>
								<mml:mi mathvariant="normal">e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>3</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>→</mml:mo>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">M</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mn>0.5</mml:mn>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">S</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mi mathvariant="normal">n</mml:mi>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">F</mml:mi>
								<mml:mi mathvariant="normal">e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mo>(</mml:mo>
						<mml:mi mathvariant="normal">n</mml:mi>
						<mml:mo>≥</mml:mo>
						<mml:mn>2</mml:mn>
						<mml:mo>)</mml:mo>
					</mml:math>
					<label>(3)</label>
				</disp-formula>
			</p>
			<p>
				<disp-formula id="e4">
					<mml:math id="m4" display="block">
						<mml:mn>0.5</mml:mn>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">S</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mi mathvariant="normal">n</mml:mi>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">F</mml:mi>
								<mml:mi mathvariant="normal">e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>3</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>→</mml:mo>
						<mml:mn>0.125</mml:mn>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">S</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>8</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">F</mml:mi>
								<mml:mi mathvariant="normal">e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
					</mml:math>
					<label>(4)</label>
				</disp-formula>
			</p>
			<p>
				<disp-formula id="e5">
					<mml:math id="m5" display="block">
						<mml:mn>0.125</mml:mn>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">S</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>8</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:mn>1.5</mml:mn>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:msub>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mi mathvariant="normal">O</mml:mi>
						<mml:mo>→</mml:mo>
						<mml:msubsup>
							<mml:mrow>
								<mml:mi mathvariant="normal">S</mml:mi>
								<mml:mi mathvariant="normal">O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>4</mml:mn>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>-</mml:mo>
							</mml:mrow>
						</mml:msubsup>
						<mml:mo>+</mml:mo>
						<mml:mn>2</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi mathvariant="normal">H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
					</mml:math>
					<label>(5)</label>
				</disp-formula>
			</p>
			<p>Microorganisms involved in the bioleaching processes are usually adhered to the
				surface of the mineral sulphides (sessile cells), while a part of the microbial
				population can be found dispersed in solution (plankton cells). Bacterial adhesion
				to the mineral surface seems to enhance bioleaching of ore sulfides, where the
				presence of extracellular polymeric substances mediates the contact between the
				mineral surface and the microbial cells, followed by the formation of a biofilm
				covering the mineral surface with bacterial cells embedded in a continuous layer of
				EPS (<xref ref-type="bibr" rid="B32">Giese 2019</xref>). The bacterial biofilm
				formed as a consequence of cellular adhesion is able to complex the Fe<sup>3+</sup>
				ions and potentiate the oxidative reactions on the surface of the mineral sulfide,
				promoting their dissolution (<xref ref-type="bibr" rid="B53">Latorre et al.
					2016</xref>).</p>
			<p>Thus, the presence of a higher microbial cells concentration in the bioleaching
				system is an important factor to be considered for the efficiency of this
				biohydrometallurgical process (<xref ref-type="bibr" rid="B39">Hedrich et al.
					2016</xref>). In general, microbial cells are inoculated through a process of
				incorporation of microbial cells to the ore sample in rotary tanks to favor
				agglomeration (<xref ref-type="bibr" rid="B75">Rawlings 2013</xref>).</p>
			<p>Use of microbial cells immobilized as inoculum is an alternative to ensuring a more
				uniform adhesion of the bioleaching bacteria to the ore, since the support used in
				the immobilization should ensure that the bacterial cells are leached and colonize
				the ore heap completely. Cell immobilization also contributes to increase microbial
				cells tolerance to higher concentrations of solubilized heavy metals during the
				microbial leaching process (<xref ref-type="bibr" rid="B61">Martínez and Parada
					2013</xref>).</p>
			<p><italic>A. ferrooxidans</italic> cells immobilization have been describe also to
				improve the rate of Fe<sup>2+</sup> oxidation. <italic>A. ferrooxidans</italic>
				immobilized can also keep higher cellular metabolic activity and achieve high cell
				concentrations inside reactors and heaps (<xref ref-type="bibr" rid="B34">Gómez et
					al. 2000</xref>). <xref ref-type="bibr" rid="B30">Giese and Vaz (2015)</xref>
				observed that <italic>A. ferrooxidans</italic> immobilized cells in glass beads as
				inoculum of primary nickel ore leaching showed the same efficiency as the
				conventional innoculum agglomeration method for columns tests. <xref ref-type="bibr"
					rid="B68">Nie et al. (2015)</xref> observed an average ferrous iron oxidation
				rate of 0.54 g/(L.h) and a ferrous iron oxidation ratio of 96.90 % in copper
				extraction from waste printed circuit boards via immobilization of <italic>A.
					ferrooxidans</italic> on cotton gauze.</p>
			<p><italic>A. ferrooxidans</italic> cells were also immobilized in a matrix formed by
				PVA and Na<sup>+</sup> alginate (<xref ref-type="bibr" rid="B93">Yujian et al.
					2006</xref>). A technique for obtainment of gel-matrix using
					Ca(NO<sub>3</sub>)<sub>2</sub> was applied and the PVA-calcium nitrate beads
				showed a Fe<sup>3+</sup> oxidation rate of 4.6 g/(L.h) in batch cultures.</p>
			<p>Commercial immobilized microbial cells in Ca<sup>2+</sup> alginate matrix for
				bioleaching applications was first described as “seeds” (BioSigma Bioleaching Seeds,
				BBS), which contain immobilized cells of <italic>Acidiphilium</italic> spp.,
					<italic>Leptospirillum</italic> spp., <italic>Sulfobacillus</italic> spp.,
					<italic>Acidithiobacillus</italic> spp., <italic>A. ferrooxidans</italic>,
					<italic>A. thiooxidans</italic>, <italic>Acidianus</italic> spp.,
					<italic>Ferroplasma</italic> spp., <italic>Metallosphaera</italic> spp.,
					<italic>Sulfolobus</italic> spp. and <italic>Thermoplasma</italic> spp. The
				matrix used for these bacteria cells immobilization is composed by Ca<sup>2+</sup>
				alginate, Fe<sup>2+</sup> ions (10-40 %) and Fe<sup>3+</sup> ions (60-90 %), which
				is capable of retaining 10<sup>3</sup> g microbial cells/g of immobilized material
					(<xref ref-type="bibr" rid="B63">Martínez and Parada 2015</xref>).</p>
			<p>Bioleaching process is actually considered as a high potential green technology, due
				to the minimal damage it causes to the environment and to its contribution to reduce
				the amount of greenhouse gases in our atmosphere. Moreover bioleaching has cost
				benefits especially when compared with the large-scale capital investment required
				for a chemical treatment plant. More recently, bioleaching has been considered as a
				bioremediation tool for cleaning up heavy metal pollution and hazardous industrial
				waste such as fly ash, slag, and slag and filter dust (Okoh et al. 2018). However,
				the use of microorganisms immobilized in sodium alginate for this purpose has not
				been described in the literature.</p>
		</sec>
		<sec>
			<title>BIOSORPTION FOR METAL BIOREMEDIATION IN CONTAMINATED MINING AREAS</title>
			<p>Mining activities have a considerable impact on the environment, not only by soil
				profile and structure disruption as well as by metal deposition and accumulation in
				soil, which have negative consequences on human health and on the environment (<xref
					ref-type="bibr" rid="B26">García and Álvarez 2008</xref>). Any mining industrial
				activity involves environmental risk whether by producing contaminant liquid
				effluents or solid residues containing heavy metals, and this contamination is
				generated by mining activities such as excavation, ore transference, smelting and
				refining, which discharges large amounts of spoils, effluents, wastewater and dust
				in the environment (<xref ref-type="bibr" rid="B89">Vieira and Stefenon
				2017</xref>).</p>
			<p>Heavy metals most frequently found at contaminated sites are lead, chromium, arsenic,
				zinc, cadmium, mercury, nickel and copper; and it is necessary to use bioremediation
				technologies in situ, which requires combinated biotechnological and microbiological
				techniques (<xref ref-type="bibr" rid="B26">García and Álvarez 2008</xref>, <xref
					ref-type="bibr" rid="B89">Vieira and Stefenon 2017</xref>). Biosorption is the
				most common strategy employed in bioremediation of contaminated soil, and concerns
				the application of microbes (bacteria or fungi) as the main tool. In this process, a
				passive uptake of metals and other pollutant compounds occurs by biological
				materials as dead microbial cells in free or immobilized form, reversible recovering
				contaminant elements from soil by functional groups that are present on the surface
				of biomass (<xref ref-type="bibr" rid="B84">Tapia et al. 2011</xref>, <xref
					ref-type="bibr" rid="B22">Fomina and Gadd 2014</xref>, <xref ref-type="bibr"
					rid="B89">Vieira and Stefenon 2017</xref>). </p>
			<p>Bioremediation refers to the use of biological processes for the clean-up of
				contaminated land usually involving the detoxification of hazardous substances by
				microbial species. In general, a considerable number of microorganisms are able to
				survive in the most extreme environmental conditions, including the soil of mining
				areas with high concentration of heavy metals (<xref ref-type="bibr" rid="B78">Singh
					and Tripathi 2007</xref>). In this aspect, the use of immobilized microbial
				cells has been studied and evaluated for application in metal contaminated soils
				from mining activity.</p>
			<p>Microbial processes for removal of recalcitrant compounds and heavy metals employ
				live, non-living cells or biopolymers as biosorbents (<xref ref-type="bibr"
					rid="B12">Chojnacka 2010</xref>). <xref ref-type="bibr" rid="B56">Lin and Lin
					(2005)</xref> have studied soil leaching and Cd<sup>2+</sup> adsorption
				conditions for obtainment of a biosorption process for removal of this heavy metal
				from contaminated soil. For this purpose, the authors evaluated the yeast
					<italic>Saccharomycetes pombe</italic> immobilized in chitosan and
				polyvinylalcohol (PVAL) added to alginate (10 wt. %). Results for soil leaching
				indicated high Cd<sup>2+</sup> adsorption yields (up to 95 %) in 30 min as well as
				the possibility of immobilized yeast bead reuse was feasible.</p>
			<p>Free and immobilized forms of a yeast strain, <italic>Candida krusei,</italic>
				immobilized in Ca<sup>2+</sup> alginate, were evaluated for their ability to remove
					Cu<sup>2+</sup> ions from aqueous solution. Infrared spectroscopy showed that
				the primary biosorption sites on the biosorbents were carboxylate (COO<sup>-</sup>)
				groups (<xref ref-type="bibr" rid="B58">Luk et al. 2017</xref>). <xref
					ref-type="bibr" rid="B49">Kumar and Raju (2008)</xref> have also demonstrated
				that immobilized forms of <italic>Halobacterium cutirubrum</italic> were more
				favorable to Cu<sup>2+</sup>, Cd<sup>2+</sup>, Ba<sup>2+</sup>, Mg<sup>2+</sup>,
					Zn<sup>2+</sup> and Pb<sup>2+</sup> ions removal from aqueous solution than
				bacterium free cells. Similar results were obtained for a comparison between free
				and PVAL- Ca<sup>2+</sup> alginate immobilized cells from <italic>Aspergillus
					niger</italic> fungi (<xref ref-type="bibr" rid="B86">Tsekova et al.
				2010</xref>). Alginate is considered a natural organic carrier that presents many
				functional groups to stabilize biocatalysts (<xref ref-type="bibr" rid="B83"
					>Smidsrød and Skjåk-Braek 1990</xref>). Immobilized microorganisms have
				demonstrated higher decontamination efficiency than free cells in bioremediation
				processes (<xref ref-type="bibr" rid="B20">Dzionek et al. 2016</xref>).</p>
			<p>In free cells, the interaction between heavy metal ions and microbial biomass occurs
				through the presence of active sites on the cell wall such as amino (N-H) and
				carboxylate (COO<sup>-</sup>) groups derived mainly from chitin
				(poly-N-acetylglucosamine) and glucan (poly-D-glucose) constituents. In microbial-
					Ca<sup>2+</sup> alginate immobilized form, the carboxylate groups are prominent
				once alginic acid is structurally similar to D-mannose and its C-6 position is a
				carboxylate group instead of a hydroxyl group (<xref ref-type="bibr" rid="B49">Kumar
					and Raju 2008</xref>, <xref ref-type="bibr" rid="B73">Piotrowska and Masek
					2015</xref>, <xref ref-type="bibr" rid="B50">Kumari et al. 2017</xref>).</p>
			<p>However, some studies demonstrated that <italic>Chryseomonas luteola</italic>
				bacteria immobilized in alginate bead were capable of adsorb Cd<sup>2+</sup>,
					Co<sup>2+</sup>, Ni<sup>2+</sup> and Cu<sup>2+</sup> ions mediated by its
				extracellular polymeric substances production despite presence of active groups in
				the cell wall (<xref ref-type="bibr" rid="B70">Ozdemir et al. 2005a</xref>,<xref
					ref-type="bibr" rid="B71">b</xref>). Acidophilic bacteria as
					<italic>Acidiphillium</italic> sp. have been also described by reversible
				biosorption of Fe<sup>2+</sup> ions as FeC<sub>2</sub>O<sub>4</sub> compounds
				through interactions with carboxylate groups present in its produced exopolymers
					(<xref ref-type="bibr" rid="B85">Tapia et al. 2016</xref>).</p>
			<p>These findings can be explained by the biosorption capacity of high molecular weight
				microbial polymers mainly composed by proteins, polysaccharides, uronic acids, humic
				substances and lipids. The anionic nature of these substances makes them efficient
				to effectively sequester positively charged heavy metal ions, which are easily
				absorbed by functional groups and non-carbohydrate substituent like acetamido,
				amine, sulfhydral, carboxyl, phosphodiester (techoic acid), phosphate and hydroxyl
				groups (<xref ref-type="bibr" rid="B37">Gupta and Diwan 2017</xref>).</p>
			<p>In addition, some microorganisms produce exopolysaccharides (EPS) as a requirement of
				biofilm architecture and as a mechanism to heavy metal resistance. However, in
				another aspect, secreted EPS can mobilize metals in soil (<xref ref-type="bibr"
					rid="B69">Nocelli et al. 2016</xref>, <xref ref-type="bibr" rid="B40">Hindersah
					et al. 2017</xref>). This commonly happens to rhizosphere-inhabitant species as
					<italic>Azotobacter.</italic> These species have been described by uptake of
					Cd<sup>2+</sup>, CrO<sub>4</sub>
				<sup>2-</sup> and Hg<sup>2+</sup> ions, when cultivated on contaminated soils, by
				metal ion complexation either through functional groups like carboxyl and hydroxyl
				present in its produced EPS (<xref ref-type="bibr" rid="B43">Joshi and Juwarkar
					2009</xref>, <xref ref-type="bibr" rid="B74">Rasuolv et al. 2013</xref>). </p>
			<p>In the case of <italic>Chryseomonas luteola</italic>, bacterial EPS immobilized in
					Ca<sup>2+</sup> alginate resulted in maximum Cd<sup>2+</sup> and Co<sup>2+</sup>
				ion biosorption while alginate bead alone displayed comparatively low metal ion
				adsorption efficiency (<xref ref-type="bibr" rid="B71">Ozdemir et al. 2005b</xref>).
				The same behavior was reported to <italic>Paenibacillus polymyxa</italic> EPS
				immobilized on agar beads for Pb<sup>2+</sup> removal (<xref ref-type="bibr"
					rid="B38">Hassiba et al. 2014</xref>). </p>
			<p>Ca<sup>2+</sup> alginate beads were tested for the removal of Cu<sup>2+</sup> and
					Cd<sup>2+</sup> in AMD. In column experiments, 380 g of Ca<sup>2+</sup> alginate
				beads were packed in a Pyrex column (2.5 x 100 cm) and 120 liters of AMD from the
				Ilgwang mine in Korea were successfully treated (86 % for Cu<sup>2+</sup> and 58 %
				for Cd<sup>2+</sup>). It was possible to treat more than 300 mL of AMD using only 1
				g of Ca<sup>2+</sup> alginate beads (<xref ref-type="bibr" rid="B72">Park and Lee
					2017</xref>).</p>
			<p>The gold recovery process with the use of elemental mercury (Hg<sub>0</sub>), called
				amalgamation, has been used extensively in the illegal small-scale gold mining
				activity since the mid-1980s. These activities produce millions of tons of tailings
				containing mercury, which are disposed improperly at gold mining sites and
				agricultural areas (<xref ref-type="bibr" rid="B35">Guiza and Aristizabal
					2013</xref>).</p>
			<p>Once dispersed in the environment, Hg<sub>0</sub> undergoes a series of chemical
				transformations to the consecutively formation of methylmercury (CH<sub>3</sub>Hg),
				a highly toxic and recalcitrant compound. When in contact with aquatic environments,
				it can be incorporated by fish and crustaceans and to reach man by the food chain
				causing irreversible damages to the nervous system (<xref ref-type="bibr" rid="B19"
					>Domagalski 2001</xref>).</p>
			<p>One of the ways to reduce the availability of Hg<sub>0</sub> in liquid effluents is
				the use of microbial biomass in biosorption and bioaccumulation processes, as
				previously described (<xref ref-type="bibr" rid="B81">Sinha and Khare 2012</xref>).
				Use of biocatalysts immobilized in Ca<sup>2+</sup> alginate gel for Hg<sub>0</sub>
				bioaccumulation by fungi and bacteria from synthetic effluents has been described in
				the literature (<xref ref-type="bibr" rid="B44">Kaçar et al. 2002</xref>, <xref
					ref-type="bibr" rid="B81">Sinha et al. 2012</xref>). <xref ref-type="bibr"
					rid="B80">Sinha and Khare (2012)</xref> demonstrated that immobilized
					<italic>Enterobacter</italic> sp. in Ca<sup>2+</sup> alginate promoted the
				removal of 7.3 mg Hg<sub>0</sub>/ L of industrial effluent within 72 h and 5.0 mg
				HgCl/L of synthetic effluent over the same period. A laboratory scale sequential
				bioreactor for mercury removal was designed by <xref ref-type="bibr" rid="B81">Sinha
					et al. (2012)</xref>. Efficiency of mercury removal by <italic>Bacillus
					cereus</italic> immobilized on Ca<sup>2+</sup> alginate was 104.1 mg/g on the
				third day from a synthetic effluent containing 10 mg Hg<sup>2+</sup>/L.</p>
			<p>Volatization of mercury by immobilized bacterial cells has also been described. Some
				bacteria are able to enzymatically reduce Hg<sup>2+</sup> to the volatile and less
				toxic form of Hg<sub>0</sub>, and this is also an alternative for the remediation of
				contaminated areas. <xref ref-type="bibr" rid="B95">Zeroual et al. (2001)</xref>
				evaluated different substrates for the immobilization of <italic>Klebsiella
					pneumoniae</italic> bacteria and its application in Hg<sup>2+</sup>
				volatilization. Among the substrates tested (alginate, polyacrylamide, vermiculite
				and wood chips), immobilization in Ca<sup>2+</sup> alginate presented better
				efficiency, resulting in rates of volatilization to Hg<sub>0</sub> around 89 % in a
				stable way in continuous operation for 10 days. Immobilized
					<italic>Chrolella</italic> cells systems also accumulated more mercury than free
				cells. Immobilized algae have been used for phosphates, chlorinated hydrocarbons and
				heavy metals accumulation from wastewater (<xref ref-type="bibr" rid="B88">Wilkinson
					et al. 1989</xref>).</p>
			<p>Biosorption technology has been developed as an alternative route for the recovery
				and separation of rare earth elements, and is seen as a priority and strategic
				action by several countries demanding these elements. Nowadays, rare earth elements,
				that describe any of the 15 metallic chemical elements with atomic numbers from 57
				to 71 and the chemically similar elements scandium and yttrium, had their global
				demand increased. The hundreds of uses for rare earth elements, ranging from high
				tech (lasers, computer memory modules) to energy (batteries, superconductors)
				applications had also increased the mining of rare earth containing ores and the
				environmental exposure to these lanthanides (<xref ref-type="bibr" rid="B91"
					>Yantasee et al. 2009</xref>). Their ecotoxicity is not fully characterized,
				however it is known that for alga and bacteria, ecotoxicity increases with
				increasing rare earth atomic number (<xref ref-type="bibr" rid="B33">González et al.
					2015</xref>). </p>
			<p>Predicting the possibility of increasing the concentration of lanthanides in
				effluents have been carried out using microbial cells immobilized on Ca<sup>2+</sup>
				alginate for rare earth biosorption processes. Ca<sup>2+</sup> alginate immobilized
				biomass of <italic>Bacillus subtilis</italic> was applied for La and Sm biosorption
				studies with high percentual of rare earth removal, 94.4 and 94.9 %, respectively
					(<xref ref-type="bibr" rid="B15">Coimbra et al. 2017</xref>). The kinetic study
				of La biosorption, in concentrations ranging 10-100 mg/L, showed that
					Ca<sup>2+</sup> alginate microalgal immobilized biosorbents formed by
					<italic>Ankistrodesmus</italic> sp. and <italic>Golenkinia</italic> sp. cells
				had the same behavior as the free cells, and the kinetic equilibrium was reached
				quickly in the first few minutes in contact (<xref ref-type="bibr" rid="B17">Corrêa
					et al. 2017</xref>).</p>
		</sec>
		<sec>
			<title>HYDROGEN SULPHIDE (H<sub>2</sub>S) REMOVAL</title>
			<p>Hydrogen sulfide (H<sub>2</sub>S) is among the main pollutants found in the
				atmosphere and is derived from natural or anthropogenic related microbial activity,
				including food processing, wastewater treatment, petroleum refining and natural gas,
				petrochemical industries, tanneries, pulp and paper manufacturing and composting
				processes (<xref ref-type="bibr" rid="B8">Beauchamp et al. 1984</xref>). Once in
				gaseous form, H<sub>2</sub>S is easily oxidized to sulfur dioxide (SO<sub>2</sub>)
				which is then converted to sulfuric acid (H<sub>2</sub>SO<sub>4</sub>), which can
				return to the soil as acid rain (<xref ref-type="fig" rid="f2">Fig. 2</xref>; <xref
					ref-type="bibr" rid="B59">Maat et al. 2005</xref>).</p>
			<p>
				<fig id="f2">
					<label>Fig. 2</label>
					<caption>
						<title>Schematic illustration for the sulfate cycle.</title>
					</caption>
					<graphic xlink:href="0188-4999-rica-36-03-775-gf2.png"/>
				</fig>
			</p>
			<p>Generation of H<sub>2</sub>S in mining activities is common due the presence of
				naturally occurring sulfate-reducing bacteria that reduce the pre-existing sulfate
				in the mineral composition creating H<sub>2</sub>S. This is the case of coal, for
				example, that is the world’s largest energy source for electricity generation and is
				mined on six continents. Sulfate contamination of surface and ground water from
				these mining and processing operations is well recognized and commonly monitored as
				a primary indicator of coal mining impact to surface water and groundwater, mainly
				by prominent H<sub>2</sub>S generation (Simonton and King 2013).</p>
			<p>Microbial H<sub>2</sub>S removal is based on two stages: 1) absorption stage, in
				which the Fe<sup>3+</sup> ions are converted to ferrous sulfate and the
					H<sub>2</sub>S is oxidized to its sulfur form and 2) biological oxidation stage,
				in which the Fe<sup>2+</sup> ions produced in the previous step lead to the
				formation of Fe<sup>3+</sup> again, repeating the cycles. Use of a biological
				biocatalyst requires mild conditions of temperature and pressure without the need of
				addition of chemical reagents, reducing operational costs (<xref ref-type="bibr"
					rid="B60">Malhotra et al. 2002</xref>).</p>
			<p>Biological treatment of gaseous effluents can be accomplished through the use of
				bioscrubber, biofilter and biotrickling filters, which are composed of
				microorganisms capable of degrading and incorporating organic or inorganic
				pollutants derived from gases. In these processes, bacterial species are used in the
				immobilized form, mainly for its ability to form biofilms and to fill the columns
				used for gas filtration. A gas fed batch reactor is composed by a stirred tank type
				reactor, continuously or intermittently operated in the gas phase (the target flux)
				and cyclically operated in the liquid phase (nutritive solution) with microorganisms
				immobilized on different media (<xref ref-type="bibr" rid="B77">Syed et al.
					2006</xref>, <xref ref-type="bibr" rid="B96">Zhang et al. 2009</xref>).</p>
			<p>
				<xref ref-type="bibr" rid="B13">Chung et al. (1996a)</xref> evaluated the use of a
				biofiltration system in the presence of <italic>Pseudomonas putida</italic> CH11
				cells immobilized on Ca<sup>2+</sup> alginate, which showed a 95 % H<sub>2</sub>S
				removal efficiency. In another study, a consortium of <italic>P. putida</italic>
				CH11 and <italic>Arthrobacter oxydans</italic> CH8 immobilized on the same support
				was used for the degradation of both H<sub>2</sub>S and NH<sub>3</sub> (<xref
					ref-type="bibr" rid="B14">Chung et al. 2001</xref>). Elemental sulfur or sulfate
				was produced depending on the inlet H<sub>2</sub>S concentration.</p>
		</sec>
		<sec>
			<title>ACID MINE DRAINAGE TREATMENT</title>
			<p>Acid mine drainage (AMD) is a residue from the natural oxidation of sulfide minerals,
				especially pyrite (FeS<sub>2</sub>), after exposure to moisture and oxygen, in the
				presence or absence of oxidizing bacteria. This phenomenon can be described by the
				following reactions, although they occur in a similar way with other sulphides found
				in mine tailings:</p>
			<p>
				<disp-formula id="e6">
					<mml:math id="m6" display="block">
						<mml:mn>2</mml:mn>
						<mml:mi>F</mml:mi>
						<mml:mi>e</mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi>S</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:mn>7</mml:mn>
						<mml:msub>
							<mml:mrow>
								<mml:mi>O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:mn>2</mml:mn>
						<mml:msub>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mi>O</mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mo>→</mml:mo>
						<mml:mn>2</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>F</mml:mi>
								<mml:mi>e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mn>4</mml:mn>
						<mml:mi>S</mml:mi>
						<mml:msubsup>
							<mml:mrow>
								<mml:mi>O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>4</mml:mn>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>-</mml:mo>
							</mml:mrow>
						</mml:msubsup>
						<mml:mo>+</mml:mo>
						<mml:mn>4</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
					</mml:math>
					<label>(6)</label>
				</disp-formula>
			</p>
			<p>
				<disp-formula id="e7">
					<mml:math id="m7" display="block">
						<mml:mi>F</mml:mi>
						<mml:mi>e</mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi>S</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:mn>14</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>F</mml:mi>
								<mml:mi>e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>3</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mn>8</mml:mn>
						<mml:msub>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mi>O</mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mo>→</mml:mo>
						<mml:mn>15</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>F</mml:mi>
								<mml:mi>e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mn>2</mml:mn>
						<mml:mi>S</mml:mi>
						<mml:msubsup>
							<mml:mrow>
								<mml:mi>O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>4</mml:mn>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>-</mml:mo>
							</mml:mrow>
						</mml:msubsup>
						<mml:mo>+</mml:mo>
						<mml:mn>16</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
					</mml:math>
					<label>(7)</label>
				</disp-formula>
			</p>
			<p>
				<disp-formula id="e8">
					<mml:math id="m8" display="block">
						<mml:mn>4</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>F</mml:mi>
								<mml:mi>e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mi>O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:mn>4</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>→</mml:mo>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mn>4</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>F</mml:mi>
								<mml:mi>e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>3</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mn>2</mml:mn>
						<mml:msub>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mi>O</mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mi mathvariant="normal"> </mml:mi>
					</mml:math>
					<label>(8)</label>
				</disp-formula>
			</p>
			<p>
				<disp-formula id="e9">
					<mml:math id="m9" display="block">
						<mml:mn>4</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>F</mml:mi>
								<mml:mi>e</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mo>+</mml:mo>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mn>10</mml:mn>
						<mml:msub>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mi>O</mml:mi>
						<mml:mo>+</mml:mo>
						<mml:msub>
							<mml:mrow>
								<mml:mi>O</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>2</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>→</mml:mo>
						<mml:mi mathvariant="normal"> </mml:mi>
						<mml:mn>4</mml:mn>
						<mml:mi>F</mml:mi>
						<mml:mi>e</mml:mi>
						<mml:msub>
							<mml:mrow>
								<mml:mo>(</mml:mo>
								<mml:mi>O</mml:mi>
								<mml:mi>H</mml:mi>
								<mml:mo>)</mml:mo>
							</mml:mrow>
							<mml:mrow>
								<mml:mn>3</mml:mn>
							</mml:mrow>
						</mml:msub>
						<mml:mo>+</mml:mo>
						<mml:mn>8</mml:mn>
						<mml:msup>
							<mml:mrow>
								<mml:mi>H</mml:mi>
							</mml:mrow>
							<mml:mrow>
								<mml:mo>+</mml:mo>
							</mml:mrow>
						</mml:msup>
						<mml:mi mathvariant="normal"> </mml:mi>
					</mml:math>
					<label>(9)</label>
				</disp-formula>
			</p>
			<p>At first, the minerals oxidize spontaneously by oxidation with molecular oxygen
				(Equation 6) or by indirect oxidation with the Fe<sup>3+</sup> ion (Equation 7). The
				oxidation of Fe<sup>2+</sup> ions (Equation 8) occurs at pH values close to or above
				4.5. At higher pH values, the Fe<sup>2+</sup> ion is precipitated as
					Fe(OH)<sub>3</sub> (Equation 4). The low pH conditions stimulate the
				reproduction of acidophilic bacteria that catalyze the transformation of
					Fe<sup>2+</sup> to Fe<sup>3+</sup> (Equation 9), which establishes a cycle of
				reactions that favor the total degradation of the ore (<xref ref-type="bibr"
					rid="B79">Singer and Stumm 1970</xref>, <xref ref-type="bibr" rid="B47"
					>Kleinmann et al. 1981</xref>).</p>
			<p>Sulfuric acid residues formed dissolve metals and metal hydroxides present in the
				soil, resulting in a toxic effluent composed mainly by arsenic, cadmium, zinc and
				uranium. This acidic solution generated during the formation of AMD can reach and
				contaminate nearby water bodies, causing great environmental problems (<xref
					ref-type="bibr" rid="B42">Johnson 1986</xref>, <xref ref-type="bibr" rid="B3"
					>Akcil and Koldas 2006</xref>). Due to the oxidative and leaching capacity of
				the bacteria present in AMD, the metallurgical industry started to use them in the
				extraction of metals, as in the process of bioleaching described above.</p>
			<p>Different biological processes have been described for the AMD treatment, among them
				the use of anaerobic microorganisms (such as sulfate reducing bacteria - BRS-)
					(<xref ref-type="bibr" rid="B4">Bai et al. 2013</xref>) as well as the use of
				bioreactors capable of oxidizing ions Fe<sup>2+</sup> in continuous mode (<xref
					ref-type="bibr" rid="B10">Bigham et al. 1996</xref>). </p>
			<p><italic>A. ferrooxidans</italic> bacteria has been used as a biocatalyst to produce
					Fe<sup>3+</sup> ions from Fe<sup>2+</sup> in fixed bed reactors. Substrates
				commonly used to immobilize bacterial cell in these processes are activated charcoal
				and glass beads, mainly because of the inherent capacity of the bacteria to form
				biofilms and consequently increase the concentration of microbial cells in the
				reactor (<xref ref-type="bibr" rid="B76">Schippers 2004</xref>, <xref
					ref-type="bibr" rid="B31">Giese 2017</xref>). <xref ref-type="bibr" rid="B97"
					>Zhou et al. (2006)</xref> observed an increase in
					Fe<sup>3+</sup>Fe<sup>3+</sup> ion productivity of about 4-fold (~2 g/(L.h))
				when operated a continuous-mode bioreactor with immobilized <italic>A.
					ferrooxidans</italic> cells in activated charcoal.</p>
			<p>Use of polymeric matrix entrapment techniques has also been described for the
				oxidation of Fe<sup>2+</sup> ions. Bioavailability of Fe<sup>2+</sup> ions in fixed
				bed bioreactors, both in continuous batch and repeated batch, has been performed
				with the use of biocatalysts immobilized in polyvinyl alcohol by the PVA-boric acid
				method (<xref ref-type="bibr" rid="B57">Long et al. 2004</xref>) and Ca<sup>2+</sup>
				alginate (<xref ref-type="bibr" rid="B52">Lancy and Tuovinen 1984</xref>) or
					Ca<sup>2+</sup> PVA-alginate (<xref ref-type="bibr" rid="B93">Yujian et al.
					2006</xref>, <xref ref-type="bibr" rid="B94">Yujian et al. 2007</xref>).</p>
		</sec>
		<sec sec-type="conclusions">
			<title>CONCLUSIONS</title>
			<p>The use of immobilized biocatalysts, particularly composed by microbial cells, is a
				viable alternative in economic and operational terms to be used in biotechnological
				processes. Since it seeks to preserve microbial metabolic activity in an environment
				with high cell density, it is effective in increasing the yield of the biosorption
				and bioaccumulation processes involved. Immobilized microbial cells can be applied
				suscessufuly in processes of bioremediation and effluent treatment, among others.
				Cellular immobilization using Ca<sup>2+</sup> alginate gel as a polymeric matrix has
				been an important tool in different areas, including the mineral sector, as it
				presents itself as a low cost support and good stability. </p>
			<p>For example, the use of immobilized cells in bioleaching (<xref ref-type="bibr"
					rid="B61">Martínez and Parada 2013</xref>), heavy metals (<xref ref-type="bibr"
					rid="B65">Mishra 2013</xref>), mercury (<xref ref-type="bibr" rid="B80">Sinha
					and Khare 2012</xref>) and rare-earth elements biosorption (<xref
					ref-type="bibr" rid="B17">Corrêa et al. 2017</xref>, <xref ref-type="bibr"
					rid="B15">Coimbra et al. 2017</xref>, <xref ref-type="bibr" rid="B16">Coimbra et
					al. 2019</xref>), acid mine drainage (<xref ref-type="bibr" rid="B57">Long et
					al. 2004</xref>), bioremediation (<xref ref-type="bibr" rid="B98">Zommere and
					Nikolajeva 2017</xref>), and H<sub>2</sub>S removal (Chung et al. 2010) have all
				been examined. However, most of these investigations were perfomed at laboratorial
				level, and applications of immobilized cells in mining activities in the open
				environment and industrial scale have yet to be realized.</p>
			<p>This paper consists in an overview about immobilization of microbial cels in
					Ca<sup>2+</sup> alginate matrix for applications in mineral industry, with
				emphasis on applying this technology for heap bioleaching proccesses and for in situ
				recovery of environments contaminated by mining activity.</p>
		</sec>
	</body>
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